SeqSphere+ Overview Step by Step Tutorials

• Tutorial for Assembly of Illumina Data and cgMLST Analysis Pipeline
• Tutorial for Plasmid Reconstruction and Characterization with Short- and Long-Read Data
• Tutorial for Real-Time Plasmid Transmission Detection and Alert from Long-Read Sequencing Data
• Tutorial for Assembly of Oxford Nanopore MinKNOW Sequencing Data
• Tutorial for M. tuberculosis cgMLST Typing with Illumina Data

Defining cgMLST Schemes Step by Step Tutorials

• Tutorial for Ad hoc cgMLST Scheme
• Tutorial for Stable cgMLST Scheme

Sanger Sequencing Data Step by Step Tutorials

• Tutorial for MLST Typing with Sanger Sequencing Data
• Tutorial for Spa-Typing with Sanger Sequencing Data
• Tutorial for Single Target Assembling of Sanger Sequencing Data with a Nucleotide Reference Sequence Library (e.g., HCV)